cyNeo4j: connecting Neo4j and Cytoscape

نویسندگان

  • Georg Summer
  • Thomas Kelder
  • Keiichiro Ono
  • Marijana Radonjic
  • Stephane Heymans
  • Barry Demchak
چکیده

UNLABELLED We developed cyNeo4j, a Cytoscape App to link Cytoscape and Neo4j databases to utilize the performance and storage capacities Neo4j offers. We implemented a Neo4j NetworkAnalyzer, ForceAtlas2 layout and Cypher component to demonstrate the possibilities a distributed setup of Cytoscape and Neo4j have. AVAILABILITY AND IMPLEMENTATION The app is available from the Cytoscape App Store at http://apps.cytoscape.org/apps/cyneo4j, the Neo4j plugins at www.github.com/gsummer/cyneo4j-parent and the community and commercial editions of Neo4j can be found at http://www.neo4j.com. CONTACT [email protected].

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عنوان ژورنال:

دوره 31  شماره 

صفحات  -

تاریخ انتشار 2015